Building a Biomedical Semantic Network in Wikipedia with Semantic Wiki Links

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Building a Biomedical Semantic Network in Wikipedia with Semantic Wiki Links
Authors
Benjamin M. Good
Erik L. Clarke
Salvatore Loguercio
Andrew I. Su
Publication date
2012
DOI
10.1093/database/bar060
Links
Original Preprint

Building a Biomedical Semantic Network in Wikipedia with Semantic Wiki Links - scientific work related to Wikipedia quality published in 2012, written by Benjamin M. Good, Erik L. Clarke, Salvatore Loguercio and Andrew I. Su.

Overview

Wikipedia is increasingly used as a platform for collaborative data curation, but its current technical implementation has significant limitations that hinder its use in biocuration applications. Specifically, while editors can easily link between two articles in Wikipedia to indicate a relationship, there is no way to indicate the nature of that relationship in a way that is computationally accessible to the system or to external developers. For example, in addition to noting a relationship between a gene and a disease, it would be useful to differentiate the cases where genetic mutation or altered expression causes the disease. Here, authors introduce a straightforward method that allows Wikipedia editors to embed computable semantic relations directly in the context of current Wikipedia articles. In addition, authors demonstrate two novel applications enabled by the presence of these new relationships. The first is a dynamically generated information box that can be rendered on all semantically enhanced Wikipedia articles. The second is a prototype gene annotation system that draws its content from the gene-centric articles on Wikipedia and exposes the new semantic relationships to enable previously impossible, user-defined queries.

Embed

Wikipedia Quality

Good, Benjamin M.; Clarke, Erik L.; Loguercio, Salvatore; Su, Andrew I.. (2012). "[[Building a Biomedical Semantic Network in Wikipedia with Semantic Wiki Links]]". Oxford University Press. DOI: 10.1093/database/bar060.

English Wikipedia

{{cite journal |last1=Good |first1=Benjamin M. |last2=Clarke |first2=Erik L. |last3=Loguercio |first3=Salvatore |last4=Su |first4=Andrew I. |title=Building a Biomedical Semantic Network in Wikipedia with Semantic Wiki Links |date=2012 |doi=10.1093/database/bar060 |url=https://wikipediaquality.com/wiki/Building_a_Biomedical_Semantic_Network_in_Wikipedia_with_Semantic_Wiki_Links |journal=Oxford University Press}}

HTML

Good, Benjamin M.; Clarke, Erik L.; Loguercio, Salvatore; Su, Andrew I.. (2012). &quot;<a href="https://wikipediaquality.com/wiki/Building_a_Biomedical_Semantic_Network_in_Wikipedia_with_Semantic_Wiki_Links">Building a Biomedical Semantic Network in Wikipedia with Semantic Wiki Links</a>&quot;. Oxford University Press. DOI: 10.1093/database/bar060.